Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm10766-202ENSMUST00000194123 606 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm37714-201ENSMUST00000194742 342 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm8515-201ENSMUST00000194852 576 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm19220-201ENSMUST00000222682 803 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh19Q80TF3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh19Q80TF3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms