Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm14928-201ENSMUST00000120198 477 ntBASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm42612-201ENSMUST00000197986 623 ntBASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm43170-201ENSMUST00000199827 612 ntBASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm9794-201ENSMUST00000202370 423 ntBASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm15460-201ENSMUST00000118147 391 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm28631-201ENSMUST00000190740 334 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm7653-201ENSMUST00000214567 508 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm9797-201ENSMUST00000052902 613 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh8Q7TSK3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Gm14042-201ENSMUST00000120139 833 ntBASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Gm28760-201ENSMUST00000185995 736 ntBASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms