Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Snord83b-201ENSMUST00000104546 94 ntBASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.44■□□□□ 0.7
Topbp1Q6ZQF0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Mospd4-201ENSMUST00000180618 576 ntBASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Gm37489-201ENSMUST00000191883 159 ntBASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Topbp1Q6ZQF0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Gm11222-201ENSMUST00000119005 738 ntBASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Topbp1Q6ZQF0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Rps4l-202ENSMUST00000204242 789 ntBASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Gm45186-201ENSMUST00000206874 478 ntBASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Mir433-201ENSMUST00000093564 124 ntBASIC19.41■□□□□ 0.7
Topbp1Q6ZQF0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Topbp1Q6ZQF0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms