Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.84□□□□□ -0.51
Rif1Q6PR54 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Gm11340-201ENSMUST00000119226 412 ntBASIC11.84□□□□□ -0.51
Rif1Q6PR54 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rif1Q6PR54 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm15460-201ENSMUST00000118147 391 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm15131-201ENSMUST00000119124 595 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm16379-201ENSMUST00000161469 348 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gm8762-201ENSMUST00000193486 339 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.83□□□□□ -0.52
Rif1Q6PR54 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.83□□□□□ -0.52
Rif1Q6PR54 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rif1Q6PR54 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Gm12203-201ENSMUST00000118235 598 ntBASIC11.82□□□□□ -0.52
Rif1Q6PR54 Gm12209-201ENSMUST00000120089 596 ntBASIC11.82□□□□□ -0.52
Rif1Q6PR54 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.82□□□□□ -0.52
Rif1Q6PR54 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.82□□□□□ -0.52
Rif1Q6PR54 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Mir686-201ENSMUST00000102174 109 ntBASIC11.82□□□□□ -0.52
Rif1Q6PR54 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.82□□□□□ -0.52
Rif1Q6PR54 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rif1Q6PR54 Gm14726-201ENSMUST00000120623 896 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm23218-201ENSMUST00000158124 276 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms