Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scaf4Q6PFF0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gm25925-201ENSMUST00000158314 306 ntBASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scaf4Q6PFF0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms