Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm10146-201ENSMUST00000072739 309 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Gm45930-201ENSMUST00000221330 292 ntBASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 CU024892.2-201ENSMUST00000224608 832 ntBASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Chd4Q6PDQ2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm45684-201ENSMUST00000210244 1571 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd4Q6PDQ2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Gm12384-201ENSMUST00000119228 919 ntBASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Gm1335-201ENSMUST00000121653 386 ntBASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Gm16479-201ENSMUST00000121706 932 ntBASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd4Q6PDQ2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Gm13369-201ENSMUST00000119442 987 ntBASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms