Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Gm23984-201ENSMUST00000157139 203 ntBASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Gm42612-201ENSMUST00000197986 623 ntBASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Gm43170-201ENSMUST00000199827 612 ntBASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Gm9229-201ENSMUST00000222777 126 ntBASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb4Q6P8W9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Gm43438-201ENSMUST00000198133 379 ntBASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Gm6745-201ENSMUST00000199216 526 ntBASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb4Q6P8W9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Gm14127-201ENSMUST00000117906 678 ntBASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmgb4Q6P8W9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms