Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VclQ64727 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.86□□□□□ -0.19
VclQ64727 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
VclQ64727 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.85□□□□□ -0.19
VclQ64727 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.85□□□□□ -0.19
VclQ64727 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.85□□□□□ -0.19
VclQ64727 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.85□□□□□ -0.19
VclQ64727 Gm6916-202ENSMUST00000205523 195 ntBASIC13.85□□□□□ -0.19
VclQ64727 Gm7775-201ENSMUST00000218871 853 ntBASIC13.85□□□□□ -0.19
VclQ64727 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VclQ64727 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VclQ64727 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.85□□□□□ -0.19
VclQ64727 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VclQ64727 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.85□□□□□ -0.19
VclQ64727 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VclQ64727 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VclQ64727 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
VclQ64727 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.84□□□□□ -0.19
VclQ64727 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VclQ64727 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.84□□□□□ -0.19
VclQ64727 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.84□□□□□ -0.19
VclQ64727 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VclQ64727 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VclQ64727 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VclQ64727 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VclQ64727 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VclQ64727 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
VclQ64727 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VclQ64727 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VclQ64727 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VclQ64727 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VclQ64727 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VclQ64727 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VclQ64727 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VclQ64727 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms