Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
Clcn1Q64347 Gm2495-201ENSMUST00000191160 466 ntBASIC17.79■□□□□ 0.44
Clcn1Q64347 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.79■□□□□ 0.44
Clcn1Q64347 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.79■□□□□ 0.44
Clcn1Q64347 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.79■□□□□ 0.44
Clcn1Q64347 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clcn1Q64347 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Clcn1Q64347 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn1Q64347 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Clcn1Q64347 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clcn1Q64347 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Gm4804-201ENSMUST00000182234 999 ntBASIC17.78■□□□□ 0.44
Clcn1Q64347 Gm43094-201ENSMUST00000196549 921 ntBASIC17.78■□□□□ 0.44
Clcn1Q64347 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Clcn1Q64347 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.78■□□□□ 0.44
Clcn1Q64347 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clcn1Q64347 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn1Q64347 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.77■□□□□ 0.44
Clcn1Q64347 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn1Q64347 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.77■□□□□ 0.44
Clcn1Q64347 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.77■□□□□ 0.44
Clcn1Q64347 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.77■□□□□ 0.44
Clcn1Q64347 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn1Q64347 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.77■□□□□ 0.43
Clcn1Q64347 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn1Q64347 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn1Q64347 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.76■□□□□ 0.43
Clcn1Q64347 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.76■□□□□ 0.43
Clcn1Q64347 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn1Q64347 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Gm37714-201ENSMUST00000194742 342 ntBASIC17.76■□□□□ 0.43
Clcn1Q64347 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clcn1Q64347 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.76■□□□□ 0.43
Clcn1Q64347 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Clcn1Q64347 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Clcn1Q64347 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn1Q64347 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn1Q64347 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.75■□□□□ 0.43
Clcn1Q64347 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Clcn1Q64347 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.75■□□□□ 0.43
Clcn1Q64347 Gm15376-201ENSMUST00000122258 783 ntBASIC17.75■□□□□ 0.43
Clcn1Q64347 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms