Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Foxc1Q61572 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Foxc1Q61572 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.46□□□□□ -0.73
Foxc1Q61572 Gm22175-201ENSMUST00000175007 78 ntBASIC10.46□□□□□ -0.73
Foxc1Q61572 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Gm10253-201ENSMUST00000194270 940 ntBASIC10.46□□□□□ -0.73
Foxc1Q61572 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.46□□□□□ -0.73
Foxc1Q61572 Zmym2-202ENSMUST00000223669 1281 ntBASIC10.46□□□□□ -0.73
Foxc1Q61572 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.46□□□□□ -0.73
Foxc1Q61572 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Foxc1Q61572 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Foxc1Q61572 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Foxc1Q61572 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Foxc1Q61572 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm25287-201ENSMUST00000103846 110 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm22918-201ENSMUST00000103855 110 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm2810-201ENSMUST00000118681 990 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm15483-201ENSMUST00000120338 456 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms