Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ccne1Q61457 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccne1Q61457 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccne1Q61457 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.21■□□□□ 0.51
Ccne1Q61457 Gm29741-201ENSMUST00000192667 421 ntBASIC18.21■□□□□ 0.51
Ccne1Q61457 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccne1Q61457 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.21■□□□□ 0.51
Ccne1Q61457 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.21■□□□□ 0.51
Ccne1Q61457 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccne1Q61457 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccne1Q61457 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccne1Q61457 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ccne1Q61457 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ccne1Q61457 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccne1Q61457 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Gm13392-201ENSMUST00000117708 150 ntBASIC18.2■□□□□ 0.5
Ccne1Q61457 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Gm29127-201ENSMUST00000188304 517 ntBASIC18.2■□□□□ 0.5
Ccne1Q61457 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccne1Q61457 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.2■□□□□ 0.5
Ccne1Q61457 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccne1Q61457 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ccne1Q61457 Gm27731-201ENSMUST00000185192 107 ntBASIC18.19■□□□□ 0.5
Ccne1Q61457 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.19■□□□□ 0.5
Ccne1Q61457 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.19■□□□□ 0.5
Ccne1Q61457 Gm45841-201ENSMUST00000207700 164 ntBASIC18.19■□□□□ 0.5
Ccne1Q61457 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccne1Q61457 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccne1Q61457 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.19■□□□□ 0.5
Ccne1Q61457 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccne1Q61457 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.19■□□□□ 0.5
Ccne1Q61457 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.18■□□□□ 0.5
Ccne1Q61457 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccne1Q61457 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Ccne1Q61457 Gm13612-201ENSMUST00000119276 390 ntBASIC18.18■□□□□ 0.5
Ccne1Q61457 Gm8062-201ENSMUST00000139696 444 ntBASIC18.18■□□□□ 0.5
Ccne1Q61457 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccne1Q61457 Gm44397-201ENSMUST00000195950 113 ntBASIC18.18■□□□□ 0.5
Ccne1Q61457 Gm38671-201ENSMUST00000200573 130 ntBASIC18.18■□□□□ 0.5
Ccne1Q61457 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccne1Q61457 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccne1Q61457 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccne1Q61457 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccne1Q61457 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms