Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.56□□□□□ -0.4
Traf4Q61382 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Traf4Q61382 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.56□□□□□ -0.4
Traf4Q61382 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Traf4Q61382 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.56□□□□□ -0.4
Traf4Q61382 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Traf4Q61382 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf4Q61382 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.55□□□□□ -0.4
Traf4Q61382 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.55□□□□□ -0.4
Traf4Q61382 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Traf4Q61382 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf4Q61382 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.55□□□□□ -0.4
Traf4Q61382 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Traf4Q61382 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.54□□□□□ -0.4
Traf4Q61382 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.54□□□□□ -0.4
Traf4Q61382 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.54□□□□□ -0.4
Traf4Q61382 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm27920-201ENSMUST00000183953 96 ntBASIC12.54□□□□□ -0.4
Traf4Q61382 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Traf4Q61382 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.54□□□□□ -0.4
Traf4Q61382 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf4Q61382 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Traf4Q61382 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Traf4Q61382 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Traf4Q61382 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.53□□□□□ -0.4
Traf4Q61382 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.53□□□□□ -0.4
Traf4Q61382 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf4Q61382 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms