Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Six4Q61321 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Six4Q61321 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.19□□□□□ -0.14
Six4Q61321 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.19□□□□□ -0.14
Six4Q61321 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Six4Q61321 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six4Q61321 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
Six4Q61321 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.18□□□□□ -0.14
Six4Q61321 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Six4Q61321 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.18□□□□□ -0.14
Six4Q61321 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Six4Q61321 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Six4Q61321 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.18□□□□□ -0.14
Six4Q61321 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Gm15393-201ENSMUST00000120499 219 ntBASIC14.18□□□□□ -0.14
Six4Q61321 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Six4Q61321 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Six4Q61321 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.18□□□□□ -0.14
Six4Q61321 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.18□□□□□ -0.14
Six4Q61321 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Six4Q61321 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.18□□□□□ -0.14
Six4Q61321 Mir497b-201ENSMUST00000093601 125 ntBASIC14.18□□□□□ -0.14
Six4Q61321 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.18□□□□□ -0.14
Six4Q61321 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six4Q61321 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.17□□□□□ -0.14
Six4Q61321 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.17□□□□□ -0.14
Six4Q61321 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Six4Q61321 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.17□□□□□ -0.14
Six4Q61321 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.17□□□□□ -0.14
Six4Q61321 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.17□□□□□ -0.14
Six4Q61321 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Six4Q61321 Gm10576-201ENSMUST00000191927 825 ntBASIC14.17□□□□□ -0.14
Six4Q61321 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.17□□□□□ -0.14
Six4Q61321 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Six4Q61321 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.17□□□□□ -0.14
Six4Q61321 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.17□□□□□ -0.14
Six4Q61321 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six4Q61321 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Six4Q61321 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms