Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.59□□□□□ -0.07
Satb1Q60611 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.59□□□□□ -0.07
Satb1Q60611 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Satb1Q60611 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.59□□□□□ -0.07
Satb1Q60611 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.59□□□□□ -0.07
Satb1Q60611 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Satb1Q60611 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.58□□□□□ -0.07
Satb1Q60611 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Satb1Q60611 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Satb1Q60611 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Satb1Q60611 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.58□□□□□ -0.08
Satb1Q60611 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.58□□□□□ -0.08
Satb1Q60611 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.58□□□□□ -0.08
Satb1Q60611 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.58□□□□□ -0.08
Satb1Q60611 Gm45784-201ENSMUST00000188360 142 ntBASIC14.58□□□□□ -0.08
Satb1Q60611 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.58□□□□□ -0.08
Satb1Q60611 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.58□□□□□ -0.08
Satb1Q60611 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Satb1Q60611 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Satb1Q60611 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.58□□□□□ -0.08
Satb1Q60611 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Satb1Q60611 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Satb1Q60611 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.57□□□□□ -0.08
Satb1Q60611 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Satb1Q60611 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.57□□□□□ -0.08
Satb1Q60611 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.57□□□□□ -0.08
Satb1Q60611 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Satb1Q60611 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Satb1Q60611 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.57□□□□□ -0.08
Satb1Q60611 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.57□□□□□ -0.08
Satb1Q60611 Gm9229-201ENSMUST00000222777 126 ntBASIC14.57□□□□□ -0.08
Satb1Q60611 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Satb1Q60611 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Satb1Q60611 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
Satb1Q60611 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.57□□□□□ -0.08
Satb1Q60611 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.57□□□□□ -0.08
Satb1Q60611 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Satb1Q60611 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Satb1Q60611 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Satb1Q60611 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Satb1Q60611 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Satb1Q60611 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Satb1Q60611 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Satb1Q60611 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Satb1Q60611 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.56□□□□□ -0.08
Satb1Q60611 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms