Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm43125-201ENSMUST00000201724 730 ntBASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Gm12882-201ENSMUST00000121696 517 ntBASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5d-4Q5R1F6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm13015-201ENSMUST00000118674 204 ntBASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm18049-201ENSMUST00000208909 581 ntBASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5d-4Q5R1F6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5d-4Q5R1F6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5d-4Q5R1F6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5d-4Q5R1F6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5d-4Q5R1F6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5d-4Q5R1F6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms