Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm16026-204ENSMUST00000162652 683 ntBASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm17807-201ENSMUST00000186869 298 ntBASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.96□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm10275-202ENSMUST00000168697 495 ntBASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm4899-201ENSMUST00000178708 719 ntBASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm10275-201ENSMUST00000092620 635 ntBASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms