Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm11745-201ENSMUST00000121669 448 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn2bQ56A07 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.92□□□□□ -0.18
Scn2bQ56A07 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.91□□□□□ -0.18
Scn2bQ56A07 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Gm6973-201ENSMUST00000117080 721 ntBASIC13.91□□□□□ -0.18
Scn2bQ56A07 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Gm18057-201ENSMUST00000208220 503 ntBASIC13.91□□□□□ -0.18
Scn2bQ56A07 Chchd1-203ENSMUST00000224633 557 ntBASIC13.91□□□□□ -0.18
Scn2bQ56A07 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn2bQ56A07 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms