Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm12218-201ENSMUST00000117666 399 ntBASIC8.12□□□□□ -1.11
Herc2Q4U2R1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm2546-201ENSMUST00000182630 991 ntBASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc2Q4U2R1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm10040-201ENSMUST00000080726 1662 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm28388-201ENSMUST00000186262 437 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm43423-201ENSMUST00000198390 2094 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm15547-201ENSMUST00000122152 333 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm42511-201ENSMUST00000196160 234 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm11637-201ENSMUST00000120601 592 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm15432-201ENSMUST00000121106 195 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm25072-201ENSMUST00000175233 235 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm3096-201ENSMUST00000185770 364 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm14005-208ENSMUST00000223654 681 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc2Q4U2R1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm23949-201ENSMUST00000104027 127 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm6506-201ENSMUST00000119775 1136 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm13022-201ENSMUST00000121181 285 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm37028-201ENSMUST00000194276 107 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm17812-201ENSMUST00000204935 318 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm9111-201ENSMUST00000219394 709 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms