Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc27Q3V036 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc27Q3V036 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Gm44492-201ENSMUST00000197012 141 ntBASIC17.96■□□□□ 0.47
Ccdc27Q3V036 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc27Q3V036 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc27Q3V036 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc27Q3V036 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc27Q3V036 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc27Q3V036 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc27Q3V036 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Mir8117-201ENSMUST00000184773 107 ntBASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Gm9182-201ENSMUST00000217829 639 ntBASIC17.95■□□□□ 0.46
Ccdc27Q3V036 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.95■□□□□ 0.46
Ccdc27Q3V036 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc27Q3V036 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Gm27525-201ENSMUST00000184465 107 ntBASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc27Q3V036 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms