Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Gm18246-201ENSMUST00000221023 728 ntBASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa3Q3UPR0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Shisa3Q3UPR0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Gm14494-201ENSMUST00000118786 435 ntBASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Gm13597-201ENSMUST00000121239 375 ntBASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa3Q3UPR0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms