Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Gm9013-201ENSMUST00000132939 882 ntBASIC9.62□□□□□ -0.87
Cops9Q3U898 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.62□□□□□ -0.87
Cops9Q3U898 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Cops9Q3U898 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cops9Q3U898 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cops9Q3U898 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.61□□□□□ -0.87
Cops9Q3U898 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.61□□□□□ -0.87
Cops9Q3U898 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 AC154262.2-201ENSMUST00000224310 2293 ntBASIC9.61□□□□□ -0.87
Cops9Q3U898 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm13168-201ENSMUST00000121771 632 ntBASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Cops9Q3U898 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cops9Q3U898 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cops9Q3U898 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cops9Q3U898 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Cops9Q3U898 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cops9Q3U898 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cops9Q3U898 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cops9Q3U898 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Cops9Q3U898 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cops9Q3U898 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms