Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fndc4Q3TR08 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.02□□□□□ -0.48
Fndc4Q3TR08 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Gm15467-201ENSMUST00000120582 445 ntBASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.02□□□□□ -0.49
Fndc4Q3TR08 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Fndc4Q3TR08 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm11779-201ENSMUST00000118541 368 ntBASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm16198-201ENSMUST00000118766 670 ntBASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm27525-201ENSMUST00000184465 107 ntBASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fndc4Q3TR08 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms