Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.52□□□□□ -0.25
Atf4Q06507 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.52□□□□□ -0.25
Atf4Q06507 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.52□□□□□ -0.25
Atf4Q06507 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf4Q06507 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Atf4Q06507 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.51□□□□□ -0.25
Atf4Q06507 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.51□□□□□ -0.25
Atf4Q06507 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.51□□□□□ -0.25
Atf4Q06507 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.51□□□□□ -0.25
Atf4Q06507 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Atf4Q06507 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.51□□□□□ -0.25
Atf4Q06507 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.51□□□□□ -0.25
Atf4Q06507 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Atf4Q06507 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.51□□□□□ -0.25
Atf4Q06507 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf4Q06507 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Atf4Q06507 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.5□□□□□ -0.25
Atf4Q06507 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Atf4Q06507 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Atf4Q06507 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Gm5970-201ENSMUST00000131638 1216 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.5□□□□□ -0.25
Atf4Q06507 Gm22993-201ENSMUST00000175423 254 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Gm21139-201ENSMUST00000186594 877 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Gm8515-201ENSMUST00000194852 576 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Gm38018-201ENSMUST00000195651 540 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC13.5□□□□□ -0.25
Atf4Q06507 Gm19540-201ENSMUST00000221843 810 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 AC140209.1-201ENSMUST00000227875 284 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Atf4Q06507 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC13.5□□□□□ -0.25
Atf4Q06507 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.5□□□□□ -0.25
Atf4Q06507 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf4Q06507 BC037039-201ENSMUST00000192003 2205 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms