Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm5312-201ENSMUST00000203728 547 ntBASIC14.31□□□□□ -0.12
Gabpb1Q00420 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.31□□□□□ -0.12
Gabpb1Q00420 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.31□□□□□ -0.12
Gabpb1Q00420 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.31□□□□□ -0.12
Gabpb1Q00420 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.3□□□□□ -0.12
Gabpb1Q00420 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.29□□□□□ -0.12
Gabpb1Q00420 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Gm16476-201ENSMUST00000221544 139 ntBASIC14.29□□□□□ -0.12
Gabpb1Q00420 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.29□□□□□ -0.12
Gabpb1Q00420 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Gm15693-201ENSMUST00000120470 637 ntBASIC14.28□□□□□ -0.12
Gabpb1Q00420 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms