Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn1bP97952 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Scn1bP97952 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scn1bP97952 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn1bP97952 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.87□□□□□ -0.35
Scn1bP97952 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn1bP97952 Gm15358-201ENSMUST00000119249 520 ntBASIC12.87□□□□□ -0.35
Scn1bP97952 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Scn1bP97952 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn1bP97952 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.87□□□□□ -0.35
Scn1bP97952 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Scn1bP97952 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Scn1bP97952 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn1bP97952 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.87□□□□□ -0.35
Scn1bP97952 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn1bP97952 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn1bP97952 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn1bP97952 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1bP97952 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Scn1bP97952 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn1bP97952 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Scn1bP97952 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn1bP97952 Gm9726-201ENSMUST00000180321 678 ntBASIC12.86□□□□□ -0.35
Scn1bP97952 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.86□□□□□ -0.35
Scn1bP97952 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.86□□□□□ -0.35
Scn1bP97952 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1bP97952 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.86□□□□□ -0.35
Scn1bP97952 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1bP97952 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scn1bP97952 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.85□□□□□ -0.35
Scn1bP97952 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn1bP97952 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn1bP97952 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.85□□□□□ -0.35
Scn1bP97952 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Scn1bP97952 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms