Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccl21aP84444 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccl21aP84444 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl21aP84444 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl21aP84444 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl21aP84444 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl21aP84444 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl21aP84444 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl21aP84444 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl21aP84444 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl21aP84444 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl21aP84444 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Gm14381-201ENSMUST00000122105 414 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Gm25927-201ENSMUST00000175058 117 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccl21aP84444 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Gm43138-201ENSMUST00000199123 708 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Gm5363-201ENSMUST00000211927 938 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Itm2b-204ENSMUST00000228637 783 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Gm5161-201ENSMUST00000075243 853 ntBASIC11.62□□□□□ -0.55
Ccl21aP84444 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Ccl21aP84444 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl21aP84444 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Gm22323-201ENSMUST00000103832 109 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Gm13369-201ENSMUST00000119442 987 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccl21aP84444 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Gm2991-201ENSMUST00000173338 480 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.61□□□□□ -0.55
Ccl21aP84444 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Ccl21aP84444 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl21aP84444 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms