Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SgcbP82349 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
SgcbP82349 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.56□□□□□ -0.4
SgcbP82349 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.56□□□□□ -0.4
SgcbP82349 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.56□□□□□ -0.4
SgcbP82349 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.56□□□□□ -0.4
SgcbP82349 Gm3436-201ENSMUST00000179930 840 ntBASIC12.56□□□□□ -0.4
SgcbP82349 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.56□□□□□ -0.4
SgcbP82349 Mir7684-201ENSMUST00000183858 60 ntBASIC12.56□□□□□ -0.4
SgcbP82349 Gm28196-201ENSMUST00000187719 640 ntBASIC12.56□□□□□ -0.4
SgcbP82349 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SgcbP82349 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SgcbP82349 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.56□□□□□ -0.4
SgcbP82349 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.56□□□□□ -0.4
SgcbP82349 Gm9063-201ENSMUST00000223299 582 ntBASIC12.56□□□□□ -0.4
SgcbP82349 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SgcbP82349 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SgcbP82349 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.56□□□□□ -0.4
SgcbP82349 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcbP82349 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.55□□□□□ -0.4
SgcbP82349 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.55□□□□□ -0.4
SgcbP82349 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.55□□□□□ -0.4
SgcbP82349 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.55□□□□□ -0.4
SgcbP82349 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.55□□□□□ -0.4
SgcbP82349 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.55□□□□□ -0.4
SgcbP82349 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcbP82349 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms