Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Gm4459-201ENSMUST00000118750 468 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Gm23634-201ENSMUST00000175071 91 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cks1bP61025 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Cks1bP61025 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cks1bP61025 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Celf4-206ENSMUST00000224553 1729 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cks1bP61025 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.06□□□□□ -0.8
Cks1bP61025 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cks1bP61025 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.06□□□□□ -0.8
Cks1bP61025 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.06□□□□□ -0.8
Cks1bP61025 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.06□□□□□ -0.8
Cks1bP61025 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.06□□□□□ -0.8
Cks1bP61025 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.06□□□□□ -0.8
Cks1bP61025 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.06□□□□□ -0.8
Cks1bP61025 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.06□□□□□ -0.8
Cks1bP61025 Gm8318-201ENSMUST00000182954 872 ntBASIC10.06□□□□□ -0.8
Cks1bP61025 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cks1bP61025 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.06□□□□□ -0.8
Cks1bP61025 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.06□□□□□ -0.8
Cks1bP61025 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1bP61025 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Cks1bP61025 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.06□□□□□ -0.8
Cks1bP61025 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms