Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup43P59235 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup43P59235 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup43P59235 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup43P59235 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Nup43P59235 Gm27321-201ENSMUST00000185021 205 ntBASIC13.3□□□□□ -0.28
Nup43P59235 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup43P59235 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup43P59235 Gm9063-201ENSMUST00000223299 582 ntBASIC13.3□□□□□ -0.28
Nup43P59235 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup43P59235 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup43P59235 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup43P59235 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.3□□□□□ -0.28
Nup43P59235 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup43P59235 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.29□□□□□ -0.28
Nup43P59235 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nup43P59235 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup43P59235 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.29□□□□□ -0.28
Nup43P59235 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup43P59235 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup43P59235 Gm27306-201ENSMUST00000183970 107 ntBASIC13.29□□□□□ -0.28
Nup43P59235 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup43P59235 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Nup43P59235 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup43P59235 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup43P59235 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup43P59235 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup43P59235 Gm15460-201ENSMUST00000118147 391 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Gm3436-201ENSMUST00000179930 840 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup43P59235 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.28□□□□□ -0.28
Nup43P59235 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nup43P59235 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.28□□□□□ -0.28
Nup43P59235 Gm7775-201ENSMUST00000218871 853 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Gm18027-201ENSMUST00000218947 619 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup43P59235 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms