Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Gm13597-201ENSMUST00000121239 375 ntBASIC11.39□□□□□ -0.59
Sssca1P56873 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.39□□□□□ -0.59
Sssca1P56873 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Gm27628-201ENSMUST00000184911 107 ntBASIC11.39□□□□□ -0.59
Sssca1P56873 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Grk6-205ENSMUST00000224653 2976 ntBASIC11.39□□□□□ -0.59
Sssca1P56873 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.39□□□□□ -0.59
Sssca1P56873 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sssca1P56873 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sssca1P56873 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sssca1P56873 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.38□□□□□ -0.59
Sssca1P56873 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.38□□□□□ -0.59
Sssca1P56873 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.38□□□□□ -0.59
Sssca1P56873 Thap2-203ENSMUST00000218989 527 ntBASIC11.38□□□□□ -0.59
Sssca1P56873 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sssca1P56873 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.38□□□□□ -0.59
Sssca1P56873 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Sssca1P56873 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sssca1P56873 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.38□□□□□ -0.59
Sssca1P56873 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sssca1P56873 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sssca1P56873 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sssca1P56873 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sssca1P56873 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Gm10275-202ENSMUST00000168697 495 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Gm5864-201ENSMUST00000202263 970 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Gm10275-201ENSMUST00000092620 635 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sssca1P56873 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms