Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Cldn18P56857 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cldn18P56857 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.61□□□□□ -0.39
Cldn18P56857 Gm21470-201ENSMUST00000187680 696 ntBASIC12.61□□□□□ -0.39
Cldn18P56857 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cldn18P56857 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn18P56857 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn18P56857 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn18P56857 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn18P56857 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.6□□□□□ -0.39
Cldn18P56857 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cldn18P56857 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cldn18P56857 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn18P56857 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cldn18P56857 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm15393-201ENSMUST00000120499 219 ntBASIC12.6□□□□□ -0.39
Cldn18P56857 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.6□□□□□ -0.39
Cldn18P56857 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Mir7684-201ENSMUST00000183858 60 ntBASIC12.6□□□□□ -0.39
Cldn18P56857 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.6□□□□□ -0.39
Cldn18P56857 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.6□□□□□ -0.39
Cldn18P56857 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn18P56857 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn18P56857 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn18P56857 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Gm12585-201ENSMUST00000117307 290 ntBASIC12.59□□□□□ -0.39
Cldn18P56857 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.59□□□□□ -0.39
Cldn18P56857 Gm15487-201ENSMUST00000122373 465 ntBASIC12.59□□□□□ -0.39
Cldn18P56857 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn18P56857 Mir8102-201ENSMUST00000184148 139 ntBASIC12.59□□□□□ -0.39
Cldn18P56857 Gm10576-201ENSMUST00000191927 825 ntBASIC12.59□□□□□ -0.39
Cldn18P56857 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn18P56857 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.59□□□□□ -0.39
Cldn18P56857 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn18P56857 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn18P56857 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms