Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.69□□□□□ -0.06
Ephb3P54754 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Gm6013-201ENSMUST00000212264 699 ntBASIC14.69□□□□□ -0.06
Ephb3P54754 Gm6983-201ENSMUST00000214912 628 ntBASIC14.69□□□□□ -0.06
Ephb3P54754 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ephb3P54754 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ephb3P54754 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ephb3P54754 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ephb3P54754 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ephb3P54754 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Ephb3P54754 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.68□□□□□ -0.06
Ephb3P54754 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ephb3P54754 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Ephb3P54754 Gm16177-201ENSMUST00000120728 718 ntBASIC14.68□□□□□ -0.06
Ephb3P54754 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.68□□□□□ -0.06
Ephb3P54754 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.68□□□□□ -0.06
Ephb3P54754 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Ephb3P54754 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ephb3P54754 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Gm24526-201ENSMUST00000082921 158 ntBASIC14.68□□□□□ -0.06
Ephb3P54754 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.68□□□□□ -0.06
Ephb3P54754 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ephb3P54754 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ephb3P54754 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ephb3P54754 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ephb3P54754 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ephb3P54754 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ephb3P54754 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.67□□□□□ -0.06
Ephb3P54754 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 Gm11803-201ENSMUST00000119966 444 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 Gm13385-201ENSMUST00000121089 220 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Gm18027-201ENSMUST00000218947 619 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ephb3P54754 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.67□□□□□ -0.06
Ephb3P54754 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.67□□□□□ -0.06
Ephb3P54754 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ephb3P54754 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ephb3P54754 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms