Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Gm18889-201ENSMUST00000174284 929 ntBASIC14.08□□□□□ -0.16
Fdft1P53798 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Fdft1P53798 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.08□□□□□ -0.16
Fdft1P53798 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.08□□□□□ -0.16
Fdft1P53798 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Fdft1P53798 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.08□□□□□ -0.16
Fdft1P53798 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Fdft1P53798 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.07□□□□□ -0.16
Fdft1P53798 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Fdft1P53798 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Gm14822-201ENSMUST00000122247 291 ntBASIC14.07□□□□□ -0.16
Fdft1P53798 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Gm2213-201ENSMUST00000197485 688 ntBASIC14.07□□□□□ -0.16
Fdft1P53798 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.07□□□□□ -0.16
Fdft1P53798 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.07□□□□□ -0.16
Fdft1P53798 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.07□□□□□ -0.16
Fdft1P53798 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fdft1P53798 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.06□□□□□ -0.16
Fdft1P53798 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.06□□□□□ -0.16
Fdft1P53798 Gm24513-201ENSMUST00000174964 138 ntBASIC14.06□□□□□ -0.16
Fdft1P53798 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Gm27397-201ENSMUST00000184997 107 ntBASIC14.06□□□□□ -0.16
Fdft1P53798 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Fdft1P53798 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.06□□□□□ -0.16
Fdft1P53798 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms