Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.51□□□□□ -0.25
Sox3P53784 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox3P53784 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.51□□□□□ -0.25
Sox3P53784 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Sox3P53784 Gm27920-201ENSMUST00000183953 96 ntBASIC13.51□□□□□ -0.25
Sox3P53784 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.51□□□□□ -0.25
Sox3P53784 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox3P53784 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sox3P53784 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox3P53784 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sox3P53784 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox3P53784 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox3P53784 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox3P53784 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Gm20445-201ENSMUST00000061905 565 ntBASIC13.5□□□□□ -0.25
Sox3P53784 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sox3P53784 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox3P53784 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox3P53784 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox3P53784 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.49□□□□□ -0.25
Sox3P53784 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sox3P53784 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.49□□□□□ -0.25
Sox3P53784 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Gm24543-201ENSMUST00000103867 82 ntBASIC13.49□□□□□ -0.25
Sox3P53784 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Gm15806-201ENSMUST00000120696 955 ntBASIC13.49□□□□□ -0.25
Sox3P53784 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Shd-206ENSMUST00000225145 998 ntBASIC13.49□□□□□ -0.25
Sox3P53784 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Sox3P53784 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sox3P53784 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.49□□□□□ -0.25
Sox3P53784 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox3P53784 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox3P53784 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox3P53784 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox3P53784 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms