Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 AA619741-201ENSMUST00000195095 646 ntBASIC13.66□□□□□ -0.22
Hnf4aP49698 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hnf4aP49698 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hnf4aP49698 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Hnf4aP49698 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.66□□□□□ -0.22
Hnf4aP49698 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hnf4aP49698 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hnf4aP49698 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm13015-201ENSMUST00000118674 204 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.65□□□□□ -0.22
Hnf4aP49698 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm44335-201ENSMUST00000196879 141 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm44297-201ENSMUST00000198304 141 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm44346-201ENSMUST00000198851 141 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hnf4aP49698 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hnf4aP49698 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Hnf4aP49698 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hnf4aP49698 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.65□□□□□ -0.22
Hnf4aP49698 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
Hnf4aP49698 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hnf4aP49698 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Hnf4aP49698 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.64□□□□□ -0.23
Hnf4aP49698 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hnf4aP49698 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.64□□□□□ -0.23
Hnf4aP49698 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.64□□□□□ -0.23
Hnf4aP49698 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.64□□□□□ -0.23
Hnf4aP49698 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hnf4aP49698 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hnf4aP49698 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.64□□□□□ -0.23
Hnf4aP49698 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Hnf4aP49698 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.64□□□□□ -0.23
Hnf4aP49698 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Hnf4aP49698 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.64□□□□□ -0.23
Hnf4aP49698 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Gm43474-201ENSMUST00000196415 774 ntBASIC13.64□□□□□ -0.23
Hnf4aP49698 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Hnf4aP49698 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hnf4aP49698 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hnf4aP49698 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hnf4aP49698 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms