Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Vps4bP46467 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps4bP46467 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps4bP46467 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps4bP46467 Gm38225-201ENSMUST00000194001 393 ntBASIC14.29□□□□□ -0.12
Vps4bP46467 Gm44608-201ENSMUST00000206827 855 ntBASIC14.29□□□□□ -0.12
Vps4bP46467 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps4bP46467 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps4bP46467 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vps4bP46467 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4bP46467 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps4bP46467 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Vps4bP46467 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.28□□□□□ -0.12
Vps4bP46467 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.28□□□□□ -0.12
Vps4bP46467 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.28□□□□□ -0.12
Vps4bP46467 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.28□□□□□ -0.12
Vps4bP46467 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.28□□□□□ -0.12
Vps4bP46467 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.28□□□□□ -0.12
Vps4bP46467 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps4bP46467 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.28□□□□□ -0.12
Vps4bP46467 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps4bP46467 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps4bP46467 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4bP46467 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vps4bP46467 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vps4bP46467 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vps4bP46467 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Vps4bP46467 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4bP46467 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vps4bP46467 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.27□□□□□ -0.12
Vps4bP46467 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Vps4bP46467 Gm15957-201ENSMUST00000118893 974 ntBASIC14.27□□□□□ -0.13
Vps4bP46467 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.27□□□□□ -0.13
Vps4bP46467 Rprl2-201ENSMUST00000157150 290 ntBASIC14.27□□□□□ -0.13
Vps4bP46467 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.27□□□□□ -0.13
Vps4bP46467 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vps4bP46467 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Vps4bP46467 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vps4bP46467 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms