Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Sox6P40645 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.24□□□□□ -0.29
Sox6P40645 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox6P40645 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox6P40645 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox6P40645 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox6P40645 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox6P40645 Gm11025-201ENSMUST00000140773 466 ntBASIC13.23□□□□□ -0.29
Sox6P40645 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox6P40645 Gm27397-201ENSMUST00000184997 107 ntBASIC13.23□□□□□ -0.29
Sox6P40645 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.23□□□□□ -0.29
Sox6P40645 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sox6P40645 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sox6P40645 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox6P40645 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox6P40645 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox6P40645 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox6P40645 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.22□□□□□ -0.29
Sox6P40645 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.22□□□□□ -0.29
Sox6P40645 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox6P40645 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.22□□□□□ -0.29
Sox6P40645 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 Gm24513-201ENSMUST00000174964 138 ntBASIC13.22□□□□□ -0.29
Sox6P40645 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.22□□□□□ -0.29
Sox6P40645 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.22□□□□□ -0.29
Sox6P40645 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.22□□□□□ -0.29
Sox6P40645 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox6P40645 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox6P40645 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms