Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Gm38294-201ENSMUST00000192831 381 ntBASIC11.57□□□□□ -0.56
Timp3P39876 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.57□□□□□ -0.56
Timp3P39876 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Timp3P39876 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Timp3P39876 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Timp3P39876 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.56□□□□□ -0.56
Timp3P39876 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.56□□□□□ -0.56
Timp3P39876 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.56□□□□□ -0.56
Timp3P39876 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.56□□□□□ -0.56
Timp3P39876 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Timp3P39876 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Timp3P39876 Gm27838-201ENSMUST00000184829 128 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm29310-201ENSMUST00000185468 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21825-201ENSMUST00000185728 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm29109-201ENSMUST00000185895 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21896-201ENSMUST00000186520 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21873-201ENSMUST00000186728 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21794-201ENSMUST00000187056 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21880-201ENSMUST00000187275 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21826-201ENSMUST00000187451 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21198-201ENSMUST00000188393 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21749-201ENSMUST00000189343 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21901-201ENSMUST00000189568 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm29424-201ENSMUST00000189716 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm28599-201ENSMUST00000189838 694 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21867-201ENSMUST00000189917 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm29269-201ENSMUST00000190087 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21722-201ENSMUST00000190153 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm28423-201ENSMUST00000190701 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21899-201ENSMUST00000190745 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21910-201ENSMUST00000191163 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21849-201ENSMUST00000191571 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm28678-201ENSMUST00000191593 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Gm20910-201ENSMUST00000193268 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm21871-201ENSMUST00000194621 696 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.56□□□□□ -0.56
Timp3P39876 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.56□□□□□ -0.56
Timp3P39876 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.56□□□□□ -0.56
Timp3P39876 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Timp3P39876 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Timp3P39876 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Timp3P39876 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.55□□□□□ -0.56
Timp3P39876 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Timp3P39876 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms