Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fen1P39749 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.19□□□□□ -0.14
Fen1P39749 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Fen1P39749 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fen1P39749 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fen1P39749 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Fen1P39749 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.18□□□□□ -0.14
Fen1P39749 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.18□□□□□ -0.14
Fen1P39749 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Gm1401-201ENSMUST00000122048 772 ntBASIC14.18□□□□□ -0.14
Fen1P39749 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.18□□□□□ -0.14
Fen1P39749 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.18□□□□□ -0.14
Fen1P39749 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.18□□□□□ -0.14
Fen1P39749 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.18□□□□□ -0.14
Fen1P39749 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.18□□□□□ -0.14
Fen1P39749 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Fen1P39749 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fen1P39749 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.17□□□□□ -0.14
Fen1P39749 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.17□□□□□ -0.14
Fen1P39749 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Fen1P39749 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fen1P39749 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.17□□□□□ -0.14
Fen1P39749 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.16□□□□□ -0.14
Fen1P39749 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fen1P39749 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.16□□□□□ -0.14
Fen1P39749 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fen1P39749 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.16□□□□□ -0.14
Fen1P39749 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fen1P39749 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fen1P39749 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Fen1P39749 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fen1P39749 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms