Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdkn1aP39689 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm14928-201ENSMUST00000120198 477 ntBASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm4804-201ENSMUST00000182234 999 ntBASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.6□□□□□ -0.55
Cdkn1aP39689 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.6□□□□□ -0.55
Cdkn1aP39689 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.6□□□□□ -0.55
Cdkn1aP39689 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdkn1aP39689 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.59□□□□□ -0.55
Cdkn1aP39689 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdkn1aP39689 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Cdkn1aP39689 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdkn1aP39689 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdkn1aP39689 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdkn1aP39689 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdkn1aP39689 Gm23984-201ENSMUST00000157139 203 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms