Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.88□□□□□ -0.19
HmgclP38060 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.88□□□□□ -0.19
HmgclP38060 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Gm44344-201ENSMUST00000200287 129 ntBASIC13.88□□□□□ -0.19
HmgclP38060 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.88□□□□□ -0.19
HmgclP38060 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
HmgclP38060 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.88□□□□□ -0.19
HmgclP38060 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.87□□□□□ -0.19
HmgclP38060 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.87□□□□□ -0.19
HmgclP38060 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HmgclP38060 Gm15460-201ENSMUST00000118147 391 ntBASIC13.87□□□□□ -0.19
HmgclP38060 Gm13453-201ENSMUST00000118708 357 ntBASIC13.87□□□□□ -0.19
HmgclP38060 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Gm27321-201ENSMUST00000185021 205 ntBASIC13.87□□□□□ -0.19
HmgclP38060 Gm17837-201ENSMUST00000186435 985 ntBASIC13.87□□□□□ -0.19
HmgclP38060 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HmgclP38060 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.87□□□□□ -0.19
HmgclP38060 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.87□□□□□ -0.19
HmgclP38060 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HmgclP38060 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
HmgclP38060 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.86□□□□□ -0.19
HmgclP38060 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Gm13223-201ENSMUST00000118609 747 ntBASIC13.86□□□□□ -0.19
HmgclP38060 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.86□□□□□ -0.19
HmgclP38060 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.86□□□□□ -0.19
HmgclP38060 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
HmgclP38060 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.86□□□□□ -0.19
HmgclP38060 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HmgclP38060 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HmgclP38060 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms