Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.38□□□□□ -0.75
TbpP29037 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.38□□□□□ -0.75
TbpP29037 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Mir3081-201ENSMUST00000175305 84 ntBASIC10.38□□□□□ -0.75
TbpP29037 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.38□□□□□ -0.75
TbpP29037 Gm9182-201ENSMUST00000217829 639 ntBASIC10.38□□□□□ -0.75
TbpP29037 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.38□□□□□ -0.75
TbpP29037 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TbpP29037 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TbpP29037 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Gm7889-201ENSMUST00000185591 958 ntBASIC10.37□□□□□ -0.75
TbpP29037 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
TbpP29037 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.37□□□□□ -0.75
TbpP29037 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.37□□□□□ -0.75
TbpP29037 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TbpP29037 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.37□□□□□ -0.75
TbpP29037 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TbpP29037 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
TbpP29037 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms