Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RxrbP28704 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.14□□□□□ -0.15
RxrbP28704 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Gm12350-201ENSMUST00000121208 462 ntBASIC14.14□□□□□ -0.15
RxrbP28704 Gm16026-204ENSMUST00000162652 683 ntBASIC14.14□□□□□ -0.15
RxrbP28704 Mir5131-201ENSMUST00000175426 93 ntBASIC14.14□□□□□ -0.15
RxrbP28704 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.14□□□□□ -0.15
RxrbP28704 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.14□□□□□ -0.15
RxrbP28704 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.14□□□□□ -0.15
RxrbP28704 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
RxrbP28704 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RxrbP28704 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.13□□□□□ -0.15
RxrbP28704 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.13□□□□□ -0.15
RxrbP28704 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RxrbP28704 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.13□□□□□ -0.15
RxrbP28704 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.13□□□□□ -0.15
RxrbP28704 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.13□□□□□ -0.15
RxrbP28704 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.13□□□□□ -0.15
RxrbP28704 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.13□□□□□ -0.15
RxrbP28704 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RxrbP28704 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.13□□□□□ -0.15
RxrbP28704 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.13□□□□□ -0.15
RxrbP28704 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RxrbP28704 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.13□□□□□ -0.15
RxrbP28704 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RxrbP28704 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.12□□□□□ -0.15
RxrbP28704 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.12□□□□□ -0.15
RxrbP28704 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.12□□□□□ -0.15
RxrbP28704 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.12□□□□□ -0.15
RxrbP28704 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
RxrbP28704 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.12□□□□□ -0.15
RxrbP28704 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.12□□□□□ -0.15
RxrbP28704 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.12□□□□□ -0.15
RxrbP28704 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.12□□□□□ -0.15
RxrbP28704 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.12□□□□□ -0.15
RxrbP28704 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms