Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nckap1P28660 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Gm10710-201ENSMUST00000047876 3971 ntBASIC14□□□□□ -0.17
Nckap1P28660 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nckap1P28660 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Gm12138-201ENSMUST00000122180 951 ntBASIC14□□□□□ -0.17
Nckap1P28660 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14□□□□□ -0.17
Nckap1P28660 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14□□□□□ -0.17
Nckap1P28660 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Nckap1P28660 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14□□□□□ -0.17
Nckap1P28660 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nckap1P28660 Gm45546-201ENSMUST00000211053 2394 ntBASIC14□□□□□ -0.17
Nckap1P28660 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nckap1P28660 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nckap1P28660 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nckap1P28660 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.99□□□□□ -0.17
Nckap1P28660 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.99□□□□□ -0.17
Nckap1P28660 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.99□□□□□ -0.17
Nckap1P28660 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.99□□□□□ -0.17
Nckap1P28660 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nckap1P28660 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.99□□□□□ -0.17
Nckap1P28660 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.99□□□□□ -0.17
Nckap1P28660 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Gm18027-201ENSMUST00000218947 619 ntBASIC13.99□□□□□ -0.17
Nckap1P28660 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.99□□□□□ -0.17
Nckap1P28660 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nckap1P28660 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nckap1P28660 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.99□□□□□ -0.17
Nckap1P28660 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nckap1P28660 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nckap1P28660 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nckap1P28660 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms