Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cntn1P12960 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Cntn1P12960 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.5□□□□□ -0.25
Cntn1P12960 Gm12585-201ENSMUST00000117307 290 ntBASIC13.5□□□□□ -0.25
Cntn1P12960 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Cntn1P12960 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.5□□□□□ -0.25
Cntn1P12960 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.5□□□□□ -0.25
Cntn1P12960 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.5□□□□□ -0.25
Cntn1P12960 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Cntn1P12960 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.5□□□□□ -0.25
Cntn1P12960 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.5□□□□□ -0.25
Cntn1P12960 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cntn1P12960 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.49□□□□□ -0.25
Cntn1P12960 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cntn1P12960 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cntn1P12960 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.49□□□□□ -0.25
Cntn1P12960 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cntn1P12960 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.49□□□□□ -0.25
Cntn1P12960 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.49□□□□□ -0.25
Cntn1P12960 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.49□□□□□ -0.25
Cntn1P12960 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.49□□□□□ -0.25
Cntn1P12960 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cntn1P12960 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cntn1P12960 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cntn1P12960 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.49□□□□□ -0.25
Cntn1P12960 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cntn1P12960 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Cntn1P12960 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.49□□□□□ -0.25
Cntn1P12960 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cntn1P12960 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cntn1P12960 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cntn1P12960 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cntn1P12960 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms