Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm2451-201ENSMUST00000199447 999 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm10290-201ENSMUST00000200451 999 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Olfr286-202ENSMUST00000205305 969 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.65□□□□□ -0.86
Smim1P0C8K7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smim1P0C8K7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smim1P0C8K7 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.65□□□□□ -0.87
Smim1P0C8K7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim1P0C8K7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Gm45058-201ENSMUST00000205810 766 ntBASIC9.64□□□□□ -0.87
Smim1P0C8K7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim1P0C8K7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC9.64□□□□□ -0.87
Smim1P0C8K7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms