Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp6P0C0A3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp6P0C0A3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm15920-201ENSMUST00000118998 402 ntBASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm6222-201ENSMUST00000120787 396 ntBASIC15.34■□□□□ 0.05
Chmp6P0C0A3 AA543401-201ENSMUST00000164248 1269 ntBASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp6P0C0A3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp6P0C0A3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.33■□□□□ 0.05
Chmp6P0C0A3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp6P0C0A3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp6P0C0A3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms