Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.83□□□□□ -0.2
Hoxa4P06798 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.83□□□□□ -0.2
Hoxa4P06798 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Gm9797-201ENSMUST00000052902 613 ntBASIC13.83□□□□□ -0.2
Hoxa4P06798 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa4P06798 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxa4P06798 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Hoxa4P06798 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.82□□□□□ -0.2
Hoxa4P06798 Gm16215-201ENSMUST00000161990 637 ntBASIC13.82□□□□□ -0.2
Hoxa4P06798 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa4P06798 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.81□□□□□ -0.2
Hoxa4P06798 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Gm7488-201ENSMUST00000117148 684 ntBASIC13.81□□□□□ -0.2
Hoxa4P06798 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.81□□□□□ -0.2
Hoxa4P06798 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.81□□□□□ -0.2
Hoxa4P06798 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa4P06798 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa4P06798 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms