Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Gm15957-201ENSMUST00000118893 974 ntBASIC12.56□□□□□ -0.4
P06344 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.56□□□□□ -0.4
P06344 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.56□□□□□ -0.4
P06344 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.56□□□□□ -0.4
P06344 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P06344 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
P06344 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.56□□□□□ -0.4
P06344 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06344 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.56□□□□□ -0.4
P06344 Syt7-204ENSMUST00000223586 1344 ntBASIC12.56□□□□□ -0.4
P06344 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.55□□□□□ -0.4
P06344 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
P06344 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.55□□□□□ -0.4
P06344 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.55□□□□□ -0.4
P06344 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P06344 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.55□□□□□ -0.4
P06344 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.55□□□□□ -0.4
P06344 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P06344 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
P06344 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P06344 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06344 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P06344 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.54□□□□□ -0.4
P06344 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.54□□□□□ -0.4
P06344 Gm16215-201ENSMUST00000161990 637 ntBASIC12.54□□□□□ -0.4
P06344 Gm5866-201ENSMUST00000177881 973 ntBASIC12.54□□□□□ -0.4
P06344 Gm24694-201ENSMUST00000180054 110 ntBASIC12.54□□□□□ -0.4
P06344 Gm27663-201ENSMUST00000184839 110 ntBASIC12.54□□□□□ -0.4
P06344 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P06344 Gm33320-201ENSMUST00000192232 530 ntBASIC12.54□□□□□ -0.4
P06344 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.54□□□□□ -0.4
P06344 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P06344 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.54□□□□□ -0.4
P06344 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.54□□□□□ -0.4
P06344 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
P06344 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06344 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.53□□□□□ -0.4
P06344 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
P06344 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Gm15321-201ENSMUST00000121290 288 ntBASIC12.53□□□□□ -0.4
P06344 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P06344 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.53□□□□□ -0.4
P06344 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.53□□□□□ -0.4
P06344 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.53□□□□□ -0.4
P06344 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P06344 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P06344 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms