Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm27838-201ENSMUST00000184829 128 ntBASIC11.83□□□□□ -0.52
Hoxa3P02831 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gm7730-201ENSMUST00000212486 454 ntBASIC11.83□□□□□ -0.52
Hoxa3P02831 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.82□□□□□ -0.52
Hoxa3P02831 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.82□□□□□ -0.52
Hoxa3P02831 Gm4875-201ENSMUST00000118257 786 ntBASIC11.82□□□□□ -0.52
Hoxa3P02831 Gm15653-201ENSMUST00000119247 907 ntBASIC11.82□□□□□ -0.52
Hoxa3P02831 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.82□□□□□ -0.52
Hoxa3P02831 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxa3P02831 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.82□□□□□ -0.52
Hoxa3P02831 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxa3P02831 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.81□□□□□ -0.52
Hoxa3P02831 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.81□□□□□ -0.52
Hoxa3P02831 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.81□□□□□ -0.52
Hoxa3P02831 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa3P02831 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa3P02831 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Hoxa3P02831 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxa3P02831 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.81□□□□□ -0.52
Hoxa3P02831 Gm29667-201ENSMUST00000190817 490 ntBASIC11.81□□□□□ -0.52
Hoxa3P02831 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Gm44855-201ENSMUST00000205725 362 ntBASIC11.81□□□□□ -0.52
Hoxa3P02831 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.81□□□□□ -0.52
Hoxa3P02831 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa3P02831 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms